Breakfast Egg Muffins

Featured in: Comfort Food

Whip up these delightful golden egg muffins, featuring a savory blend of fluffy eggs, melted cheddar, crispy bacon, and vibrant bell peppers. They're an ideal choice for a convenient, make-ahead breakfast, offering a warm and satisfying start to any busy day. These handheld treats are packed with flavor and nutrients, making them a family favorite.

Preparing these is simple: whisk eggs, milk, and seasonings, then fold in your choice of cheese, vegetables, and protein. Bake until golden, then cool and serve. They're easily customizable with different meats or cheeses, and excellent served with a dash of hot sauce. Enjoy them warm straight from the oven or reheat them from your fridge or freezer.

These muffins are naturally gluten-free and can be stored for several days, perfect for meal prepping. Quick to prepare and even quicker to enjoy, they bring a burst of flavor to your morning routine without the fuss.

Updated on Sat, 31 Jan 2026 09:23:00 GMT
Golden-brown Breakfast Egg Muffins with melted cheddar, bacon, and bell peppers on a rustic white plate. Save
Golden-brown Breakfast Egg Muffins with melted cheddar, bacon, and bell peppers on a rustic white plate. | whisknjoy.com

The smell of bacon sizzling on Sunday mornings used to wake me up before my alarm even went off. My roommate Sarah would be in the kitchen, already chopping vegetables and cracking eggs into a mixing bowl. We started making these muffins when we realized we needed something portable for those chaotic weekday commutes. Now the whole apartment building knows when we are batch cooking breakfast for the week.

Last winter my sister came to visit and I made a batch using leftover ham from Christmas dinner. She ended up taking the recipe back to her college apartment and now her roommates request them every Sunday night. The best part is how customizable they are whatever vegetables or cheese are sitting in your fridge can become tomorrows breakfast.

Ingredients

  • 6 large eggs: Room temperature eggs whisk up fluffier and incorporate more evenly into the mixture
  • 1/2 cup milk: Whole milk creates the richest texture but any milk you have works perfectly
  • 1/2 cup shredded cheddar cheese: Sharp cheddar adds the best flavor punch but mild cheddar melts more smoothly
  • 1/2 cup diced bell peppers: Red peppers bring sweetness while green peppers add a slight bite
  • 1/2 cup diced onions: Dice them small so they cook through evenly in the muffin cups
  • 1/2 cup cooked and crumbled bacon: The bacon must be fully cooked before adding since the oven time is too short to cook raw meat
  • 1/2 teaspoon salt: Enhances all the other flavors without making them taste salty
  • 1/4 teaspoon black pepper: Freshly cracked pepper makes a noticeable difference in depth
  • 1/4 teaspoon garlic powder: Distributes garlic flavor evenly without any raw bite
  • 1/4 teaspoon paprika: Adds a beautiful golden color and subtle smokiness
  • Cooking spray or olive oil: Grease every single cup thoroughly or the muffins will stick stubbornly

Instructions

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Get your oven ready:
Preheat to 350°F and position a rack in the center of the oven for even baking
Prepare the muffin tin:
Coat each cup generously with cooking spray getting into all the corners and edges
Whisk the eggs and milk:
Beat them together until the mixture turns a uniform pale yellow and feels slightly frothy
Add everything else:
Throw in the cheese vegetables bacon and seasonings then stir until every spoonful looks identical
Fill the muffin cups:
Pour the mixture stopping about two thirds up each cup so they have room to rise without overflowing
Bake until set:
Cook for 18 to 20 minutes until the tops are golden and a toothpick comes out clean from the center
Let them rest:
Wait 5 minutes before running a knife around the edges to pop them out gently
Product image
Create smooth frozen drinks, slushies, and frappés for desserts and parties using juices, coffee, or wine.
Check price on Amazon
Hearty and fluffy Breakfast Egg Muffins studded with bacon and peppers, fresh from the oven on a wooden board. Save
Hearty and fluffy Breakfast Egg Muffins studded with bacon and peppers, fresh from the oven on a wooden board. | whisknjoy.com

My dad started keeping a stash of these in his freezer after heart surgery forced him to eat healthier breakfasts. He says pulling one out and microwaving it for 45 seconds makes him feel like he is eating something special instead of a diet meal. Now he experiments with different vegetables and keeps a notebook of which combinations his grandkids like best.

Make Them Vegetarian

Simply skip the bacon and add extra vegetables or a handful of fresh spinach. I love adding diced tomatoes and fresh basil in summer or mushrooms and thyme when the weather turns cold.

Cheese Variations

Feta cheese adds a tangy brightness that pairs beautifully with spinach while mozzarella makes them incredibly gooey and kid friendly. Pepper jack cheese kicks up the heat for anyone who likes their morning meal with a bit of a bite.

Storage And Reheating

Store cooled muffins in an airtight container in the refrigerator for up to five days or freeze them for three months. Reheat refrigerated muffins for 30 seconds in the microwave or frozen ones for about one minute.

  • Place a paper towel under them when reheating to absorb excess moisture
  • The oven at 350°F for 10 minutes restores the crispy texture better than the microwave
  • Let frozen muffins thaw in the fridge overnight for the most even reheating
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Prep meals effortlessly by chopping vegetables, slicing meats, and serving dinner with the right knife always ready.
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Savory Breakfast Egg Muffins lined in a muffin tin, garnished with fresh herbs and ready for a quick grab-and-go snack. Save
Savory Breakfast Egg Muffins lined in a muffin tin, garnished with fresh herbs and ready for a quick grab-and-go snack. | whisknjoy.com

There is something deeply satisfying about opening the fridge on a Monday morning and seeing a row of these muffins ready to grab. They have turned our most hectic mornings into something almost peaceful.

Recipe FAQ

Can I prepare these egg muffins ahead of time?

Absolutely! These are perfect for meal prepping. Once baked, let them cool completely, then store them in an airtight container in the refrigerator for up to 5 days. You can easily reheat them in the microwave for a quick breakfast.

Are there any good variations for the ingredients?

Yes, these muffins are very versatile. You can swap bacon for cooked sausage or ham, or make them vegetarian by adding spinach or mushrooms. Experiment with different cheeses like feta or mozzarella for a unique flavor.

What's the best way to store and reheat these?

Store cooked and cooled muffins in an airtight container in the refrigerator for up to 5 days. To reheat, microwave them for 30-60 seconds until warm. They also freeze well; thaw overnight in the fridge before reheating.

Are these egg muffins suitable for a gluten-free diet?

Yes, as written, this preparation is naturally gluten-free. However, if you are adding ingredients like sausage, always double-check the labels to ensure they do not contain hidden gluten.

What can I serve with these for extra flavor?

For an added kick, serve these egg muffins with a side of your favorite salsa or a dash of hot sauce. They also pair well with a fresh fruit salad or a slice of avocado.

Breakfast Egg Muffins

Golden egg muffins filled with cheese, bacon, and peppers. A delicious, make-ahead option for quick, satisfying mornings.

Prep duration
10 min
Cook duration
20 min
Complete duration
30 min
Created by Sophia Turner

Classification Comfort Food

Skill Level Easy

Cultural Background American

Output 4 Portion Count

Dietary considerations No Gluten, Low-Carbohydrate

Components

Eggs & Dairy

01 6 large eggs
02 1/2 cup milk
03 1/2 cup shredded cheddar cheese

Vegetables

01 1/2 cup diced bell peppers (red, green, or yellow)
02 1/2 cup diced onions

Proteins

01 1/2 cup cooked and crumbled bacon (or sausage)

Seasonings

01 1/2 teaspoon salt
02 1/4 teaspoon black pepper
03 1/4 teaspoon garlic powder
04 1/4 teaspoon paprika

For Greasing

01 Cooking spray or olive oil (for muffin tin)

Preparation Steps

Stage 01

Preheat Oven: Preheat oven to 350°F (175°C).

Stage 02

Prepare Muffin Tin: Grease a standard 12-cup muffin tin with cooking spray or olive oil.

Stage 03

Mix Egg Base: In a large bowl, whisk together eggs and milk until well combined and slightly frothy.

Stage 04

Combine Ingredients: Stir in cheddar cheese, bell peppers, onions, bacon (or sausage), salt, black pepper, garlic powder, and paprika until evenly mixed.

Stage 05

Fill Muffin Cups: Pour the mixture into the prepared muffin tin, filling each cup about 2/3 full.

Stage 06

Bake Muffins: Bake for 18-20 minutes, or until muffins are set and lightly golden. A toothpick inserted in the center should come out clean.

Stage 07

Cool and Remove: Remove from oven and let cool for 5 minutes. Carefully loosen muffins with a knife if needed and remove from tin.

Stage 08

Serve or Store: Serve warm, or cool completely and store in an airtight container in the refrigerator for up to 5 days. Reheat in the microwave before serving.

Necessary tools

  • Muffin tin (12-cup)
  • Mixing bowl
  • Whisk
  • Measuring cups and spoons
  • Knife and cutting board

Allergy details

Review all ingredients for potential allergens and consult with healthcare professionals if you're unsure about any item.
  • Contains: Eggs, Milk/Dairy
  • May contain: Pork (bacon/sausage), depending on protein choice
  • Gluten-free as written, but always check labels on sausage or other add-ins

Nutritional content (each portion)

These values are provided as estimates only and shouldn't replace professional medical guidance.
  • Energy: 150
  • Fats: 10 g
  • Carbohydrates: 2 g
  • Proteins: 11 g